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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015946230.1_cds_XP_016488463.1_79087
CDS Infomation

[gene=LOC107808449] [db_xref=GeneID:107808449] [protein=protein TPX2-like] [protein_id=XP_016488463.1] [location=join(12965..13106,14354..14450,14560..14716,14801..14831,14933..15110,15228..15324,15413..15523,15652..15765,15841..16014,16117..16179,16253..16330,16416..16574,16663..16794,16883..16966,17051..17170,17272..17438,17530..17638,17729..17788,17869..17963,18047..18167)] [gbkey=CDS]
Sequence

ATGGAAGATCCGAATTTGATAATTGACCCGGATTATGAGTTCGAGGCGCCACGATTCTAC
GACTTTATGAATGGAGAAACGGAGGAGGATATGCGGAAGGCTGAACTTTGGTTCGAGTCT
ACAATCAGCTATGCCCCTTCTCCTTTTACGCAAAGAATCAAGAAGAGTGGTAGAACATTT
CAACTTGAGAGCCTATGTGATTTTACCAAAGACGAGGAAGTGCAGGATAATAATTCAAGG
CCTACAACCGAGCCCTCTGCTTCTGGAACTAAGGACGAGGTAAGGTTAAATGGTGGGATT
GAAGAGCATGCAGCGGCGCTCACTTCTTCTCGAAGTAAGGAAGTGGTAACGCCAAATGCG
ATTACTGAAAAACCTGGTAGCAGTCCTCCTAATCCGGAACCTATTCAGAAGCAGTCAAAT
GTAGAAGAAATTAGTACCCCCGCACCACCAATGATATCTCTGAAGAGTGACAGGAAGACT
AATTCCAAGAAGCAACAGACTGCTAAAAAGATCGCCAGCATTCTTAGAAATCCATCAGCA
TTACAGTCAAAATCTAACATGCAACAGTCACAATTGAAGAGTGGTAATCCAGCTAGTACG
AGGAAGCAACCAACCGTGAAAAGTGCCATTAAAGCACCTAATTTTGCTCATGAAAACCAA
GCTATAAAGAGACAGAAACTAGAAGACGGAAAATCCAGACAGATTCTTAACATCAAACCT
CAGATTCTGCCGCACAAAACAAGAGTTGGAGTTGCTAGCAGCAGTTCCGCCTTACTCTCT
TCGACTGCAAAAACTCATAAAAAGGATAGAAAGATGTATGTTCGGGAACCAGTTGCCCCA
TTTGTTTCAACAGCAGAAATGATGAAAAAGTTCCAATCTAGCACCAGGGAGATGTCACTA
TCTCGCATGAGCAATTCTACTTTACATGATGATCCAGCTGTTATGCAGAGGAAGCATAAG
CTTATATTGACCAGGCCTAAAGAACCTGAATTTGTAACAGCTCAACGTGTTCGTCCAACA
AGAGTCAAGAGTTCAGCTGAGCTAGAGGAAGAAATGATGGCCAAAATTCCCAAGTTTAAG
GCTCGACCATTAAACAAAAAGATATTGGAAATTCCAACTCTACCAGCATTACCGAAGAGT
ACACCTCAACTACCAGAATTTAAGGAATTTCATTTGCAAACTATGGCACGGGCGAATCAA
AATGCTGAAACATCAACAGTTGCATCAATAGAATCTACTCAGAGTCATCAATGGAAGCCG
ACGCATCTTACAGCTCCAAAATCACCTCTTCTTAAAACATCACTAAGAGCACGGCCTCCA
AAGATCAAAAGCTCTGAAGAAATGGAAAAGGAAGAACTTGAAAAAGTTCCCATTTTTAAG
GCAAGGCCATTGAATAAGAAGATTTTTGAAAGTAAGGGAGATTTGGGGATGTTCTGCAAC
ATAAAGAGGCAGGTAACAGTGCCTCAGGAATTTCATTTTGCCACAGATGAACGTATTCCG
CCTCCAACTAACGTAGCTGATATATTTGACAAGCTTTCCCTTAATTCTGAACCTCAAAAT
GACAAGACTACTCTCCCTAGAAACACCGCCCCGAATCCTTTTCATCTCCACACTGAGGAA
CGAGGTGCAGAGAAAGAGAGGAGATTGTTCACCGAACTTCTACATAAACAAATCGAGGAG
GAGCGGTCCAGAATTCACAAAGCAACTCCGTATCCATACACCACTGATTATCCCGTGATT
CCACCAAAACCAGAACCAAAGCAGTGCACAAGACCGGAACCTTTCCAATTGGAGAGTCTC
ACTAAGCATGAGGAGGAGATGCGGAGGCATATGGAAGAAAGGCGAAGAATGGAGGAGGAA
GAAGCAAAGATGAGGATTTTTAAGGCGCAACCAGTATTGAAAGAGGACCCAATACCAGTT
CCTGAGAAAGTACGTAAACCCCTCACTGAAGTTCAAGACTTTAAACTGCATGTAGATCAC
CGTGCTCATGATAGAGCTGAGTTCGATAAGAAGATTAAGGAGAAAGAGATGATGTATAAA
AGGTATAGAGAGGAGGCAGAATCTGCAAAAATGATGGAGGAAGAGAAGGCGCTGAAACAA
CTGAGGAGAACTTTGGTGCCCCATGCAAGACCTGTGCCTAAATTTGATCATCCATTTCAA
CCTCAGAAGTCTTCAAAACAAGTGACAAAGGCAAGATCACCAAAGCTACAGATTGTTAAG
AGAAAAGAAAGGAGGGCAATGACCTGCCCTTATGCGGCAGCTTCTAGTGCTGCCTACCAA
ATGAGGTAG

Peptide Sequence

PEP ID

XP_016488463.1
PEP Infomation

PREDICTED: protein TPX2-like [Nicotiana tabacum]
Sequence

MEDPNLIIDPDYEFEAPRFYDFMNGETEEDMRKAELWFESTISYAPSPFTQRIKKSGRTF
QLESLCDFTKDEEVQDNNSRPTTEPSASGTKDEVRLNGGIEEHAAALTSSRSKEVVTPNA
ITEKPGSSPPNPEPIQKQSNVEEISTPAPPMISLKSDRKTNSKKQQTAKKIASILRNPSA
LQSKSNMQQSQLKSGNPASTRKQPTVKSAIKAPNFAHENQAIKRQKLEDGKSRQILNIKP
QILPHKTRVGVASSSSALLSSTAKTHKKDRKMYVREPVAPFVSTAEMMKKFQSSTREMSL
SRMSNSTLHDDPAVMQRKHKLILTRPKEPEFVTAQRVRPTRVKSSAELEEEMMAKIPKFK
ARPLNKKILEIPTLPALPKSTPQLPEFKEFHLQTMARANQNAETSTVASIESTQSHQWKP
THLTAPKSPLLKTSLRARPPKIKSSEEMEKEELEKVPIFKARPLNKKIFESKGDLGMFCN
IKRQVTVPQEFHFATDERIPPPTNVADIFDKLSLNSEPQNDKTTLPRNTAPNPFHLHTEE
RGAEKERRLFTELLHKQIEEERSRIHKATPYPYTTDYPVIPPKPEPKQCTRPEPFQLESL
TKHEEEMRRHMEERRRMEEEEAKMRIFKAQPVLKEDPIPVPEKVRKPLTEVQDFKLHVDH
RAHDRAEFDKKIKEKEMMYKRYREEAESAKMMEEEKALKQLRRTLVPHARPVPKFDHPFQ
PQKSSKQVTKARSPKLQIVKRKERRAMTCPYAAASSAAYQMR

Transcript Sequence

Gene sequence data has not been registered.